Architect is a pipeline for automatic metabolic model reconstruction.  Given the protein sequences of an organism, enzyme annotation is first performed through ensemble approaches, followed by gap-filling.

The information in this folder is meant to be used by Architect.  Please do not manipulate (modify, delete or add) any files or folders here as this may lead to unexpected behaviour at runtime.

The folder called enzyme_annotation contain information that is required by Architect to perform enzyme annotation.  The folder model_reconstruction contains databases and further instructions for Architect to perform metabolic model reconstruction; for more information, please refer to the README file within the folder.