Gene Details


gene name: atpF


locus tag k12ECK3729 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b3736
locus tag w3110JW3714
gene name k12atpF
locus nameatpF
synonyms of locus namepapF, uncF, unc

SCOPno information
pfam idPF00430
pfam domainATP synthase B/B' CF(0)
tigrfam idTIGR01144
nameATP_synt_b
functionATP synthase F0, B subunit

swissprot nameATPF_ECOLI
descriptionATP synthase B chain (EC 3.6.3.14).
seq length156
fastaseq

go idGO:0009274; GO:0019866; GO:0015986
go termcell wall (sensu Bacteria); inner membrane; ATP synthesis coupled proton transport

gene product descriptionF0 sector of membrane-bound ATP synthase, subunit b
comment gene product description
evidenceE
context
gene product descEnzyme
cell locationMembrane Anchored
featuresCDS

functional category codeC
functional categoryEnergy production and conversion

reference #1Targeted mutagenesis of the b subunit of F1F0 ATP synthase in Escherichia coli: Glu-77 through Gln-85.

McCormick K., Cain B. (J Bacteriol. 1991 Nov; 173(22):7240-8)
reference #2Prediction of transmembrane topology of F0 proteins from Escherichia coli F1F0 ATP synthase using variational and hydrophobic moment analyses.

Vik S., Dao N. (Biochim Biophys Acta. 1992 Dec 7; 1140(2):199-207)
reference #3Assembly of the Escherichia coli F1F0 ATPase, a large multimeric membrane-bound enzyme.

Brusilow W. (Mol Microbiol. 1993 Aug; 9(3):419-24)
reference #4Subunit organization and structure in the F0 sector of Escherichia coli F1F0 ATP synthase.

Fillingame R., Jones P., Jiang W., Valiyaveetil F., Dmitriev O. (Biochim Biophys Acta. 1998 Jun 10; 1365(1-2):135-42)
reference #5Structure of the membrane domain of subunit b of the Escherichia coli F0F1 ATP synthase.

Dmitriev O., Jones P., Jiang W., Fillingame R. (J Biol Chem. 1999 May 28; 274(22):15598-604)
reference #6Targeted mutagenesis of the b subunit of F1F0 ATP synthase in Escherichia coli: Glu-77 through Gln-85.

McCormick K., Cain B. (J Bacteriol. 1991 Nov; 173(22):7240-8)
reference #7Role of the b subunit of the Escherichia coli proton-translocating ATPase. A mutagenic analysis.

Porter A., Kumamoto C., Aldape K., Simoni R. (J Biol Chem. 1985 Jul 5; 260(13):8182-7)
reference #8The atp operon: nucleotide sequence of the promoter and the genes for the membrane proteins, and the delta subunit of Escherichia coli ATP-synthase.

Gay N., Walker J. (Nucleic Acids Res. 1981 Aug 25; 9(16):3919-26)
reference #9Nucleotide sequence of the genes for F0 components of the proton-translocating ATPase from Escherichia coli: prediction of the primary structure of F0 subunits.

Kanazawa H., Mabuchi K., Kayano T., Noumi T., Sekiya T., Futai M. (Biochem Biophys Res Commun. 1981 Nov 30; 103(2):613-20)
reference #10The nucleotide sequence of the atp genes coding for the F0 subunits a, b, c and the F1 subunit delta of the membrane bound ATP synthase of Escherichia coli.

Nielsen J., Hansen F., Hoppe J., Friedl P., von Meyenburg K. (Mol Gen Genet. 1981; 184(1):33-9)
reference #11Structure and function of H+-ATPase: what we have learned from Escherichia coli H+-ATPase.

Kanazawa H., Futai M.
reference #12DNA sequence around the Escherichia coli unc operon. Completion of the sequence of a 17 kilobase segment containing asnA, oriC, unc, glmS and phoS.

Walker J., Gay N., Saraste M., Eberle A. (Biochem J. 1984 Dec 15; 224(3):799-815)
reference #13Nucleotide sequence of the gene coding for the delta subunit of proton translocating ATPase of Escherichia coli.

Mabuchi K., Kanazawa H., Kayano T., Futai M. (Biochem Biophys Res Commun. 1981 Sep 16; 102(1):172-9)

phylogenetic profile
 
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63
58 56 1 57 50 1 50 50 61 1 1 57 64 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 114 114 113 116 102 107 104 103 126 106 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62 62 62 57
62 61 53 50 1 52 57 1 59 60 60 58 60 58 1 1 1 1 50 1
1 1 70 1 57 57 57 57 57 62 62 63 57 57 1 1 1 1 1 1
1 135 113 107 110 123 132 228 247 247 245 160 130 130 154 123 160 224 148 150
146 241 241 241 184 247 247 176 183 179 106 112 110 101 100 227 229 229 50 1
1 1 1 1 1 1 1 64 1 60 1 1 1 67 1 1 1 1 1 1
1 1 1 1 1 1 1 1 56 1 1 1 1 1 1 1 1 1 1