Gene Details


gene name: talB


locus tag k12ECK0008 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b0008
locus tag w3110JW0007
gene name k12talB
locus nametalB
synonyms of locus nameyaaK

scop id51569
superfamilyAldolase
pfam idPF00923
pfam domainTransaldolase
tigrfam idTIGR00874
nametalAB
functiontransaldolase

swissprot nameTALB_ECOLI
descriptionTransaldolase B (EC 2.2.1.2).
seq length316
fastaseq

go idGO:0005737; GO:0009052
go termcytoplasm; pentose-phosphate shunt, non-oxidative branch

gene product descriptiontransaldolase B
comment gene product description
evidenceE
context
gene product descEnzyme
cell locationCytoplasmic
featuresCDS

functional category codeG
functional categoryCarbohydrate transport and metabolism

reference #1The SWISS-PROT protein sequence data bank, recent developments.

Bairoch A., Boeckmann B. (Nucleic Acids Res. 1993 Jul 1; 21(13):3093-6)
reference #2Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region.

Yura T., Mori H., Nagai H., Nagata T., Ishihama A., Fujita N., Isono K., Mizobuchi K., Nakata A. (Nucleic Acids Res. 1992 Jul 11; 20(13):3305-8)
reference #3Identification of catalytically important residues in the active site of Escherichia coli transaldolase.

Schörken U., Thorell S., Schürmann M., Jia J., Sprenger G., Schneider G. (Eur J Biochem. 2001 Apr; 268(8):2408-15)
reference #4Transaldolase B of Escherichia coli K-12: cloning of its gene, talB, and characterization of the enzyme from recombinant strains.

Sprenger G., Schörken U., Sprenger G., Sahm H. (J Bacteriol. 1995 Oct; 177(20):5930-6)
reference #5Crystal structure of transaldolase B from Escherichia coli suggests a circular permutation of the alpha/beta barrel within the class I aldolase family.

Jia J., Huang W., Schörken U., Sahm H., Sprenger G., Lindqvist Y., Schneider G. (Structure. 1996 Jun 15; 4(6):715-24)
reference #6Crystal structure of the reduced Schiff-base intermediate complex of transaldolase B from Escherichia coli: mechanistic implications for class I aldolases.

Jia J., Schörken U., Lindqvist Y., Sprenger G., Schneider G. (Protein Sci. 1997 Jan; 6(1):119-24)
reference #7Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12.

Link A., Robison K., Church G. (Electrophoresis. 1997 Aug; 18(8):1259-313)

phylogenetic profile
 
1 1 1 1 1 1 1 83 84 1 1 1 65 1 1 1 68 69 1 53
1 1 50 57 53 56 53 53 52 61 62 59 89 50 50 338 78 79 50 75
75 80 66 51 1 1 1 83 67 300 300 301 330 332 55 53 53 1 333 335
337 321 343 337 343 334 344 68 82 59 78 58 1 1 1 57 69 68 69 67
69 66 68 74 73 1 1 72 1 73 70 73 73 73 1 1 1 1 1 1
1 1 62 1 1 1 1 1 1 68 68 1 1 1 63 63 63 63 63 75
1 289 308 323 346 355 1 573 619 619 619 496 1 1 491 343 496 546 355 361
357 599 599 599 442 522 619 464 456 454 293 301 294 1 1 569 569 567 79 74
73 278 278 278 287 286 285 70 66 1 340 1 68 85 69 1 66 1 1 66
300 315 321 320 326 327 318 333 373 326 320 359 370 373 1 172 1 1 1