Gene Details


gene name: setA


locus tag k12ECK0072 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b0070
locus tag w3110JW0069
gene name k12setA
locus namesetA
synonyms of locus nameyabM

SCOPno information
pfam idPF07690
pfam domainMajor Facilitator Superfamily
tigrfam idTIGR00899
name2A0120
functionsugar efflux transporter

swissprot nameSETA_ECOLI
descriptionSugar efflux transporter A.
seq length392
fastaseq

go idGO:0009274; GO:0019866; GO:0015543; GO:0016052; GO:0016052
go termcell wall (sensu Bacteria); inner membrane; lactose/glucose efflux transporter activity; carbohydrate catabolism; carb catab

gene product descriptionbroad specificity sugar efflux system
comment gene product description
evidenceE
context
gene product descTransporter
cell locationIntegral Membrane Protein
featuresCDS

COGno information

reference #1Functional and biochemical characterization of Escherichia coli sugar efflux transporters.

Liu J., Miller P., Willard J., Olson E. (J Biol Chem. 1999 Aug 13; 274(33):22977-84)
reference #2The identification of a new family of sugar efflux pumps in Escherichia coli.

Liu J., Miller P., Gosink M., Olson E. (Mol Microbiol. 1999 Mar; 31(6):1845-51)

phylogenetic profile
 
1 1 1 1 1 1 1 1 59 1 1 1 52 1 1 51 1 54 1 1
1 1 50 1 1 1 1 1 1 1 1 54 50 1 1 98 1 1 1 1
1 1 1 1 50 50 52 69 1 1 1 1 57 57 1 1 1 1 1 1
1 1 1 1 1 1 76 1 1 1 50 56 55 1 1 56 58 57 58 1
55 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 54 1 150 150 150 150 150 1 1 1 55 55 1 1 1 1 1 50
1 57 1 1 1 1 1 414 397 395 395 1 1 1 372 1 1 1 1 67
53 399 399 399 55 751 751 227 1 222 55 1 1 1 1 1 543 543 1 1
51 1 1 1 1 1 1 61 160 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50 1 1