Gene Details


gene name: rimK


locus tag k12ECK0843 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b0852
locus tag w3110JW0836
gene name k12rimK
locus namerimK
synonyms of locus namenek

scop id56059
superfamilyGlutathione synthetase ATP-binding domain-like
pfam idPF02222
pfam domainATP-grasp domain
tigrfam idTIGR00768
namerimK_fam
functionalpha-L-glutamate ligases, RimK fa

swissprot nameRIMK_ECOLI
descriptionRibosomal protein S6 modification protein.
seq length300
fastaseq

go idGO:0005737; GO:0009281; GO:0003735; GO:0006412
go termcytoplasm; cytosolic ribosome (sensu Bacteria); structural constituent of ribosome; protein biosynthesis

gene product descriptionribosomal protein S6 modification protein
comment gene product description
evidenceE
context
gene product descStructural component
cell locationCytoplasmic
featuresCDS

functional category codeH; J
functional categoryCoenzyme transport and metabolism ; Translation, ribosomal structure and biogenesis

reference #1Isolation and characterization of mutants of Escherichia coli K12 resistant to the new aminoglycoside antibiotic, amikacin.

Hull R., Klinger J., Moody E. (J Gen Microbiol. 1976 Jun; 94(2):389-94)
reference #2Characterization of the gene rimK responsible for the addition of glutamic acid residues to the C-terminus of ribosomal protein S6 in Escherichia coli K12.

Kang W., Icho T., Isono S., Kitakawa M., Isono K. (Mol Gen Genet. 1989 Jun; 217(2-3):281-8)

phylogenetic profile
 
90 108 107 88 1 74 1 83 84 1 157 169 79 65 68 66 1 1 1 1
1 58 1 1 1 1 1 1 1 1 1 1 1 1 1 59 59 54 65 68
68 1 65 57 1 1 1 66 1 56 53 54 51 51 1 63 65 55 1 74
67 57 59 60 326 57 62 1 294 1 1 1 1 1 1 1 1 1 1 53
1 1 1 51 1 1 1 55 1 1 1 1 1 1 1 62 1 1 1 1
76 1 100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52
1 1 1 52 1 1 374 459 584 582 585 251 363 363 224 62 248 1 391 388
386 540 540 540 399 577 580 404 368 366 1 284 338 1 323 1 1 1 1 1
1 1 1 1 1 1 1 1 77 1 1 257 1 1 95 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 102 101 1 1 1 1 1