Gene Details


gene name: ribF


locus tag k12ECK0026 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b0025
locus tag w3110JW0023
gene name k12ribF
locus nameribF
synonyms of locus nameyaaC

scop id52374
superfamilyNucleotidylyl transferase
pfam idPF06574; PF01687
pfam domainRiboflavin kinase (Flavokinase); Riboflavin kinase / FAD synthetase
tigrfam idTIGR00083
nameribF
functionriboflavin biosynthesis protein RibF

swissprot nameRIBF_ECOLI
descriptionRiboflavin biosynthesis protein ribF [Includes: Riboflavin kinase|(EC 2.7.1.26) (Flavokinase); FMN adenylyltransferase (EC 2.7.7.2) (FAD|pyrophosphorylase) (FAD synthetase)].
seq length313
fastaseq

go idGO:0005737
go termcytoplasm

gene product descriptionbifunctional riboflavin kinase and FAD synthetase
comment gene product description
evidenceE
context
gene product descEnzyme
cell locationCytoplasmic
featuresCDS

functional category codeH
functional categoryCoenzyme transport and metabolism

reference #1Characterization of the ileS-lsp operon in Escherichia coli. Identification of an open reading frame upstream of the ileS gene and potential promoter(s) for the ileS-lsp operon.

Kamio Y., Lin C., Regue M., Wu H. (J Biol Chem. 1985 May 10; 260(9):5616-20)
reference #2A genome-based approach for the identification of essential bacterial genes.

Arigoni F., Talabot F., Peitsch M., Edgerton M., Meldrum E., Allet E., Fish R., Jamotte T., Curchod M., Loferer H. (Nat Biotechnol. 1998 Sep; 16(9):851-6)

phylogenetic profile
 
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118
148 167 172 192 186 193 186 186 189 159 170 173 185 173 173 199 180 173 189 202
202 189 188 196 1 1 1 190 179 260 260 262 260 260 238 244 239 233 296 184
187 159 176 152 171 179 182 187 174 187 207 85 84 97 94 88 166 167 167 179
174 171 159 189 155 137 152 155 140 159 165 160 165 162 109 77 1 1 57 71
87 1 137 1 157 157 157 157 157 167 167 153 147 147 156 156 157 155 155 177
83 223 290 1 270 278 268 468 618 618 618 328 263 261 343 311 356 437 317 309
306 553 553 553 333 618 618 349 371 360 279 229 229 232 232 474 474 474 215 172
167 143 143 143 144 149 131 186 193 157 152 161 189 127 190 1 163 116 90 163
1 1 1 1 1 1 1 1 1 55 50 1 1 1 1 52 58 1 1