Gene Details


gene name: pdxA


locus tag k12ECK0053 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b0052
locus tag w3110JW0051
gene name k12pdxA
locus namepdxA
synonyms of locus name

SCOPno information
pfam idPF04166
pfam domainPyridoxal phosphate biosynthetic protein Pdx
tigrfam idTIGR00557
namepdxA
function4-hydroxythreonine-4-phosphate dehydro

swissprot namePDXA_ECOLI
description4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-|(phosphohydroxy)-L-threonine dehydrogenase).
seq length329
fastaseq

go idGO:0005737; GO:0008615
go termcytoplasm; pyridoxine biosynthesis

gene product description4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent
comment gene product description
evidenceE
context
gene product descEnzyme
cell locationCytoplasmic
featuresCDS

functional category codeH
functional categoryCoenzyme transport and metabolism

reference #1Crystal structure of Escherichia coli PdxA, an enzyme involved in the pyridoxal phosphate biosynthesis pathway.

Sivaraman J., Li Y., Banks J., Cane D., Matte A., Cygler M. (J Biol Chem. 2003 Oct 31; 278(44):43682-90)
reference #2Overlap between pdxA and ksgA in the complex pdxA-ksgA-apaG-apaH operon of Escherichia coli K-12.

Roa B., Connolly D., Winkler M. (J Bacteriol. 1989 Sep; 171(9):4767-77)
reference #3Vitamin B6 biosynthesis: formation of pyridoxine 5'-phosphate from 4-(phosphohydroxy)-L-threonine and 1-deoxy-D-xylulose-5-phosphate by PdxA and PdxJ protein.

Laber B., Maurer W., Scharf S., Stepusin K., Schmidt F. (FEBS Lett. 1999 Apr 16; 449(1):45-8)

phylogenetic profile
 
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 184 1 1 176 1 1 232 208 209 207 209
209 216 216 208 1 1 1 237 1 217 215 217 329 328 389 343 343 353 328 184
180 142 154 155 148 185 172 145 213 197 218 111 113 139 139 160 1 1 1 171
182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 201 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 330 357 1 1 1 309 507 644 643 643 1 324 331 194 343 149 489 389 391
381 610 605 610 423 640 640 409 393 391 336 289 280 288 287 483 483 483 194 191
186 1 1 1 1 1 1 184 1 155 1 180 172 1 1 1 146 1 1 148
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1