Gene Details


gene name: nlpA


locus tag k12ECK3651 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b3661
locus tag w3110JW3635
gene name k12nlpA
locus namenlpA
synonyms of locus name

scop id53850
superfamilyPeriplasmic binding protein-like II
pfam idPF03180
pfam domainNLPA lipoprotein
tigrfam idTIGR00363
nameTIGR00363
functionlipoprotein, YaeC family

swissprot nameNLPA_ECOLI
descriptionLipoprotein 28 precursor.
seq length272
fastaseq

go idGO:0009274; GO:0019866
go termcell wall (sensu Bacteria); inner membrane

gene product descriptioncytoplasmic membrane lipoprotein-28
comment gene product description
evidenceE
context
gene product descLipoprotein
cell locationInner membrane Lipoprotein
featuresCDS

functional category codeP
functional categoryInorganic ion transport and metabolism

reference #1Lipoprotein 28, an inner membrane protein of Escherichia coli encoded by nlpA, is not essential for growth.

Yamaguchi K., Inouye M. (J Bacteriol. 1988 Aug; 170(8):3747-9)
reference #2Cloning and sequencing of an Escherichia coli gene, nlp, highly homologous to the ner genes of bacteriophages Mu and D108.

Choi Y., Nishida T., Kawamukai M., Utsumi R., Sakai H., Komano T. (J Bacteriol. 1989 Sep; 171(9):5222-5)
reference #3Affinity of the periplasmic chaperone Skp of Escherichia coli for phospholipids, lipopolysaccharides and non-native outer membrane proteins. Role of Skp in the biogenesis of outer membrane protein.

De Cock H., Schäfer U., Potgeter M., Demel R., Müller M., Tommassen J. (Eur J Biochem. 1999 Jan; 259(1-2):96-103)
reference #4Lipoprotein-28, a cytoplasmic membrane lipoprotein from Escherichia coli. Cloning, DNA sequence, and expression of its gene.

Yu F., Inouye S., Inouye M. (J Biol Chem. 1986 Feb 15; 261(5):2284-8)

phylogenetic profile
 
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111
102 96 100 92 1 1 1 1 97 95 162 143 125 1 1 188 157 1 183 181
181 141 152 176 1 1 1 171 1 167 167 167 172 175 100 107 107 1 179 1
1 1 1 1 1 1 1 1 1 1 1 167 141 144 143 144 144 144 145 83
119 88 142 1 164 154 137 116 137 142 141 141 141 141 1 1 1 1 1 1
1 1 136 1 134 130 136 133 136 133 133 82 105 107 102 102 100 102 102 1
1 111 1 1 1 1 188 330 430 424 424 216 176 176 200 1 227 282 158 158
153 285 287 285 1 288 288 244 242 233 1 149 147 143 146 275 275 273 1 1
1 78 78 78 1 1 67 1 140 153 120 1 1 1 1 1 1 1 120 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1