Gene Details


gene name: intR


locus tag k12ECK1342 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b1345
locus tag w3110JW1339
gene name k12intR
locus nameintR
synonyms of locus nameydaP

scop id56349; 47823
superfamilyDNA breaking-rejoining enzymes; lambda integrase-like, N-terminal domain
pfam idPF00589
pfam domainPhage integrase family
TIGRFAMno information

swissprot nameINTR_ECOLI
descriptionPutative lambdoid prophage Rac integrase.
seq length411
fastaseq

GOno information

gene product descriptionRac prophage; integrase
comment gene product description
evidenceC
contextcryptic prophage Rac
gene product descPhage/IS in common(including 15 pseudogenes)
cell locationCytoplasmic
featuresCDS

functional category codeL
functional categoryReplication, recombination and repair

reference detailno reference

phylogenetic profile
 
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 61 1 53 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 137 1 1 1 57 1 1 1 1 1 1
1 1 1 1 50 1 1 1 82 1 55 1 1 1 1 1 75 65 1 1
69 54 1 1 1 72 64 51 57 1 1 52 1 72 1 1 1 1 1 1
1 1 63 1 1 1 69 1 55 73 74 50 60 1 71 1 72 56 56 80
1 1 1 1 1 1 1 58 162 833 833 1 185 1 1 1 1 117 1 58
1 332 330 332 1 56 409 1 120 1 1 1 1 1 1 330 310 1 1 1
55 1 1 1 1 1 1 53 1 1 1 1 1 1 62 1 1 1 1 1
1 1 1 1 1 1 1 1 50 1 1 1 1 1 1 1 1 1 1