Gene Details


gene name: fliF


locus tag k12ECK1936 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b1938
locus tag w3110JW1922
gene name k12fliF
locus namefliF
synonyms of locus nameflaBI, flaAII 1, flaAII.1

SCOPno information
pfam idPF01514
pfam domainSecretory protein of YscJ/FliF family
tigrfam idTIGR00206
namefliF
functionflagellar M-ring protein FliF

swissprot nameFLIF_ECOLI
descriptionFlagellar M-ring protein.
seq length552
fastaseq

go idGO:0019866; GO:0019861; GO:0042330; GO:0009296
go terminner membrane; flagellum; taxis; flagella biogenesis

gene product descriptionflagellar basal-body MS-ring and collar protein
comment gene product description
evidenceE
context
gene product descStructural component
cell locationIntegral Membrane Protein
featuresCDS

functional category codeN; U
functional categoryCell motility ; Intracellular trafficking, secretion, and vesicular transport

reference #1Genetics and biogenesis of bacterial flagella.

Macnab R.
reference #2New unified nomenclature for the flagellar genes of Escherichia coli and Salmonella typhimurium.

Iino T., Komeda Y., Kutsukake K., Macnab R., Matsumura P., Parkinson J., Simon M., Yamaguchi S. (Microbiol Rev. 1988 Dec; 52(4):533-5)
reference #3Subdivision of flagellar region III of the Escherichia coli and Salmonella typhimurium chromosomes and identification of two additional flagellar genes.

Kawagishi I., Müller V., Williams A., Irikura V., Macnab R. (J Gen Microbiol. 1992 Jun; 138(6):1051-65)
reference #4Characterization of the fliE genes of Escherichia coli and Salmonella typhimurium and identification of the FliE protein as a component of the flagellar hook-basal body complex.

Müller V., Jones C., Kawagishi I., Aizawa S., Macnab R. (J Bacteriol. 1992 Apr; 174(7):2298-304)
reference #5Gene sequence, overproduction, purification and determination of the wild-type level of the Escherichia coli flagellar switch protein FliG.

Roman S., Frantz B., Matsumura P. (Gene. 1993 Oct 29; 133(1):103-8)

phylogenetic profile
 
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 167 1 1 1 1 1 1 1 1 175 1 1 152 1 1 214 113
159 184 154 227 1 1 1 160 1 413 1 414 442 450 395 1 1 400 401 1
1 1 1 1 1 1 1 219 239 240 263 208 176 224 224 241 1 87 86 125
139 143 181 1 161 1 1 1 1 84 85 85 85 85 1 1 1 1 1 1
1 1 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154
1 1 1 299 341 372 1 613 920 921 921 1 274 272 1 1 1 591 289 289
275 826 829 826 211 1 1 190 207 186 380 265 270 1 1 620 620 620 197 1
1 1 1 1 1 50 1 1 1 1 1 1 1 161 1 94 114 69 75 114
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1