Gene Details


gene name: fixX


locus tag k12ECK0045 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b0044
locus tag w3110JW0043
gene name k12fixX
locus namefixX
synonyms of locus nameyaaT

scop id54862
superfamily4Fe-4S ferredoxins
PFAMno information
TIGRFAMno information

swissprot nameFIXX_ECOLI
descriptionFerredoxin-like protein fixX.
seq length95
fastaseq

go idGO:0042413
go termcarnitine catabolism

gene product descriptionpredicted 4Fe-4S ferredoxin-type protein
comment gene product descriptionpotential role in anaerobic carnitine metabolism
evidenceC
context
gene product descCarrier, predicted
cell locationCytoplasmic
featuresCDS

functional category codeC
functional categoryEnergy production and conversion

reference #1The fix Escherichia coli region contains four genes related to carnitine metabolism.

Eichler K., Buchet A., Bourgis F., Kleber H., Mandrand-Berthelot M. (J Basic Microbiol. 1995; 35(4):217-27)

phylogenetic profile
 
50 53 51 53 1 1 1 1 1 1 1 1 1 1 1 1 52 53 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82 1
1 1 75 79 1 1 1 74 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 201 201 201 1 1 1 1 1 1 1 1 1
1 185 185 185 1 200 200 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 85 1 1 1 73 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1