Gene Details


gene name: ebgR


locus tag k12ECK3065 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b3075
locus tag w3110JW3046
gene name k12ebgR
locus nameebgR
synonyms of locus name

scop id53822; 47413
superfamilyPeriplasmic binding protein-like I; lambda repressor-like DNA-binding domains
pfam idPF00532; PF00356
pfam domainPeriplasmic binding proteins and sugar b; Bacterial regulatory proteins, lacI fami
TIGRFAMno information

swissprot nameEBGR_ECOLI
descriptionHTH-type transcriptional regulator ebgR (Ebg operon repressor).
seq length327
fastaseq

go idGO:0005737; GO:0016564; GO:0006350; GO:0016052; GO:0016052
go termcytoplasm; transcriptional repressor activity; transcription; carbohydrate catabolism; carb catab

gene product descriptionDNA-binding transcriptional repressor
comment gene product description
evidenceE
context
gene product descRegulator
cell locationCytoplasmic
featuresCDS

functional category codeK
functional categoryTranscription

reference #1Nucleotide sequence of the Escherichia coli porin thermoregulatory gene envY.

Lundrigan M., Friedrich M., Kadner R. (Nucleic Acids Res. 1989 Jan 25; 17(2):800)
reference #2DNA sequence analysis of artificially evolved ebg enzyme and ebg repressor genes.

Hall B., Betts P., Wootton J. (Genetics. 1989 Dec; 123(4):635-48)
reference #3Sequence of the ebgR gene of Escherichia coli: evidence that the EBG and LAC operons are descended from a common ancestor.

Stokes H., Hall B. (Mol Biol Evol. 1985 Nov; 2(6):478-83)

phylogenetic profile
 
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142
81 89 91 83 1 1 1 1 83 93 110 109 105 1 1 92 1 1 75 89
66 126 80 1 1 1 1 165 1 77 77 80 104 104 77 1 1 1 108 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107 108 108 191
209 188 101 209 121 186 155 173 86 104 103 90 87 103 1 1 1 1 1 1
1 1 100 1 93 94 82 94 82 86 86 188 203 203 92 92 92 92 92 114
1 67 1 1 1 1 1 162 632 640 642 120 1 1 102 1 122 108 94 102
106 101 100 101 98 591 641 95 468 492 1 106 100 62 80 109 109 109 1 79
79 1 1 1 1 1 1 1 50 1 1 72 1 102 78 1 1 1 1 1
1 1 1 1 1 1 1 1 58 1 1 1 1 1 1 1 1 1 1