Gene Details


gene name: dinD


locus tag k12ECK3635 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b3645
locus tag w3110JW3620
gene name k12dinD
locus namedinD
synonyms of locus nameorfY, pcsA, yicD

SCOPno information
PFAMno information
TIGRFAMno information

swissprot nameDIND_ECOLI
descriptionDNA-damage-inducible protein D.
seq length274
fastaseq

go idGO:0005737; GO:0006281
go termcytoplasm; DNA repair

gene product descriptionDNA-damage-inducible protein
comment gene product descriptionpart of SOS response
evidenceE
context
gene product descCell process
cell locationCytoplasmic
featuresCDS

COGno information

reference #1[Characteristics of the thermosensitivity of posterior hypothalamic neurons]

Kushakov D. (Fiziol Zh SSSR Im I M Sechenova. 1977 Sep; 63(9):1261-7)
reference #2Identification of high affinity binding sites for LexA which define new DNA damage-inducible genes in Escherichia coli.

Lewis L., Harlow G., Gregg-Jolly L., Mount D. (J Mol Biol. 1994 Aug 26; 241(4):507-23)
reference #3The pcsA gene is identical to dinD in Escherichia coli.

Ohmori H., Saito M., Yasuda T., Nagata T., Fujii T., Wachi M., Nagai K. (J Bacteriol. 1995 Jan; 177(1):156-65)
reference #4Three genes preceding pyrE on the Escherichia coli chromosome are essential for survival and normal cell morphology in stationary culture and at high temperature.

Poulsen P., Jensen K. (Res Microbiol. 142(2-3):283-8)
reference #5Bacterial transposon Tn7 utilizes two different classes of target sites.

Kubo K., Craig N. (J Bacteriol. 1990 May; 172(5):2774-8)
reference #6Molecular and mutational analysis of three genes preceding pyrE on the Escherichia coli chromosome.

Poulsen P., Andersen J., Jensen K. (Mol Microbiol. 1989 Mar; 3(3):393-404)
reference #7The pcsA gene is identical to dinD in Escherichia coli.

Ohmori H., Saito M., Yasuda T., Nagata T., Fujii T., Wachi M., Nagai K. (J Bacteriol. 1995 Jan; 177(1):156-65)
reference #8Identification of high affinity binding sites for LexA which define new DNA damage-inducible genes in Escherichia coli.

Lewis L., Harlow G., Gregg-Jolly L., Mount D. (J Mol Biol. 1994 Aug 26; 241(4):507-23)
reference #9The DNA damage-inducible dinD gene of Escherichia coli is equivalent to orfY upstream of pyrE.

Lundegaard C., Jensen K. (J Bacteriol. 1994 Jun; 176(11):3383-5)

phylogenetic profile
 
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 468 466 466 1 1 1 1 241 1 1 1 1
1 1 1 1 1 535 535 1 1 1 1 1 195 1 77 1 1 1 1 1
75 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1