Gene Details


gene name: caiF


locus tag k12ECK0035 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b0034
locus tag w3110JW0033
gene name k12caiF
locus namecaiF
synonyms of locus name

SCOPno information
PFAMno information
TIGRFAMno information

swissprot nameCAIF_ECOLI
descriptionTranscriptional activatory protein caiF.
seq length131
fastaseq

go idGO:0005737; GO:0016563; GO:0006350; GO:0009310
go termcytoplasm; transcriptional activator activity; transcription; amine catabolism

gene product descriptionDNA-binding transcriptional activator
comment gene product description
evidenceE
context
gene product descRegulator
cell locationCytoplasmic
featuresCDS

COGno information

reference #1Identification and characterization of the caiF gene encoding a potential transcriptional activator of carnitine metabolism in Escherichia coli.

Eichler K., Buchet A., Lemke R., Kleber H., Mandrand-Berthelot M. (J Bacteriol. 1996 Mar; 178(5):1248-57)

phylogenetic profile
 
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 327 335 333 1 1 1 1 1 1 1 1 1
1 208 208 208 1 335 335 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1