Gene Details


gene name: araB


locus tag k12ECK0064 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b0063
locus tag w3110JW0062
gene name k12araB
locus namearaB
synonyms of locus name

scop id53067
superfamilyActin-like ATPase domain
pfam idPF00370
pfam domainFGGY family of carbohydrate kinases, N-termi
tigrfam idTIGR01234
nameL-ribulokinase
functionL-ribulokinase

swissprot nameARAB_ECOLI
descriptionRibulokinase (EC 2.7.1.16).
seq length565
fastaseq

go idGO:0005737; GO:0016052; GO:0016052
go termcytoplasm; carbohydrate catabolism; carb catab

gene product descriptionL-ribulokinase
comment gene product description
evidenceE
context
gene product descEnzyme
cell locationCytoplasmic
featuresCDS

functional category codeC
functional categoryEnergy production and conversion

reference #1The organization of the araBAD operon of Escherichia coli.

Lee N., Gielow W., Martin R., Hamilton E., Fowler A. (Gene. 1986; 47(2-3):231-44)
reference #2AraC-DNA looping: orientation and distance-dependent loop breaking by the cyclic AMP receptor protein.

Lobell R., Schleif R. (J Mol Biol. 1991 Mar 5; 218(1):45-54)
reference #3Nucleotide sequence of the 5' end of araBAD operon messenger RNA in Escherichia coli B/r.

Lee N., Carbon J. (Proc Natl Acad Sci U S A. 1977 Jan; 74(1):49-53)
reference #4Nucleotide sequence of the L-arabinose regulatory region of Escherichia coli K12.

Smith B., Schleif R. (J Biol Chem. 1978 Oct 10; 253(19):6931-3)

phylogenetic profile
 
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 220 66 1 1 1 1 83 1 1 94 92
92 1 91 1 1 1 1 113 1 1 1 1 59 61 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58 281
254 271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 218 217 217 217 217 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 818 1085 1093 1093 1 1 1 1 1 1 108 1 1
79 1017 1019 1017 1 1094 1094 1 591 1 1 50 1 1 1 810 810 808 1 1
53 1 1 1 1 1 1 1 1 1 1 233 1 65 1 1 1 1 1 1
86 73 68 82 92 77 1 1 102 1 1 102 87 107 1 100 1 1 1