Gene Details


gene name: araA


locus tag k12ECK0063 Crenarchaeota Euryarchaeota Nanoarcheota Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Cyanobacteria Actinobacteridae Firmicutes Spirochaetes others Protist Microsporidia Fungi Metazoa Plantae
information on phylogenetic profile
locus tag mg1655b0062
locus tag w3110JW0061
gene name k12araA
locus namearaA
synonyms of locus name

SCOPno information
pfam idPF02610
pfam domainL-arabinose isomerase
TIGRFAMno information

swissprot nameARAA_ECOLI
descriptionL-arabinose isomerase (EC 5.3.1.4).
seq length500
fastaseq

go idGO:0005737; GO:0016052; GO:0016052
go termcytoplasm; carbohydrate catabolism; carb catab

gene product descriptionL-arabinose isomerase
comment gene product description
evidenceE
context
gene product descEnzyme
cell locationCytoplasmic
featuresCDS

functional category codeG
functional categoryCarbohydrate transport and metabolism

reference #1The organization of the araBAD operon of Escherichia coli.

Lee N., Gielow W., Martin R., Hamilton E., Fowler A. (Gene. 1986; 47(2-3):231-44)
reference #2AraC-DNA looping: orientation and distance-dependent loop breaking by the cyclic AMP receptor protein.

Lobell R., Schleif R. (J Mol Biol. 1991 Mar 5; 218(1):45-54)

phylogenetic profile
 
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 447
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 583
573 534 506 1 1 1 1 440 1 1 1 1 1 1 1 1 1 1 1 1
1 1 474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 772 1027 1028 1028 1 1 1 585 1 1 1 1 1
1 986 993 986 1 1 1017 1 568 1 1 1 1 1 1 786 786 788 1 1
467 1 1 1 1 1 1 1 1 1 1 1 1 560 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1